Assays

vFC™ Assays and vCal™ Standards

Vesicle Flow Cytometry (vFC™) is a standardized assay, supplied as a kit for characterizing extracellular vesicles such as exosomes and microvesicles, by size, concentration, and surface cargo. Diluted plasma or other biofluids can be analyzed via vFC™ without additional sample processing.

The assay is high throughput, run in 96 well plates, and includes relevant standards and calibrators to ensure accurate measurements and EV specificity.  It can be run on commercially available flow cytometers with sensitivity down to 40nm EVs with cargo detection down to <10 molecules per vesicle depending upon the flow cytometer being used to collect the data.  You can rely on the accuracy of this assay for critical measurements such as titrating doses of therapeutic vesicle preps. It is the subject of several publications and is validated in hundreds of thousands of samples over numerous collaborations with academic and pharmaceutical labs.

Included with vFC™ Assay Kits (sizes for single plate kit)

Included with All Kits
100 Tests vFRed™
5 Tests Lipo100™ Vesicle Standard
25 µL Vesicle Lysing Solution
100 mL vFC™ Staining Buffer
Optionally
100 Tests vTag™ Anti-Human Tetraspanin (CD9, CD63, CD81) Cocktail [Multiple Conjugates Available]
5 Tests vRP™ Tetraspanin Positive Control EVs

vFC™ FAQs

What are the recommended flow cytometers for vFC™?

VFC requires modern flow cytometers with improved sensitivity over previous generations of lymphocyte analyzers. Currently, the Beckman Coulter CytoFlex™, Cytek®; Aurora, Cytek® Northern Lights, Cytek® CellStream, and Cytek® ImageStream provide suitably sensitive optics for VFC. Other modern flow cytometers are likely suitable for vFC™. We are in the process of qualifying additional flow cytometers for our assay and will include performance information including LOD for vesicle size, concentration, and surface marker immunofluorescence.

How is vFC™ different from NTA (e.g. NanoSight™)

VFC and NTA are vesicle characterization technologies based on different detection platforms. VFC is a set of reagents including all calibrators and standards designed for analyzing vesicles on modern flow cytometers. NTA is specialized instrumentation for sizing particles that is also used for vesicle analysis.

Because NTA was designed for sizing particles, it has many limitations in vesicle analysis. In general, it is imprecise when estimating vesicle concentration. It also lacks the fluorescence sensitivity to detect antibody labeled vesicles.

VFC solves these problems with concentration estimates that are over 5-fold more precise as well as greatly enhanced fluorescence sensitivity (current limit of detection is 30 molecules/vesicle).

Other advantages of VFC

  • Vesicle specificity (NTA measures any particle, not just vesicles)
  • Throughput (VFC is capable of processing 100s of samples per day)

For more information see our page on NTA.

How does vFC™ compare to RPS (resisitive pulse sensing)?

RPS estimates size by measuring impedance of an electrical current as a particle passes through a pore.  Unlike other methods that rely upon light scatter such as NTA and conventional flow cytometry, size estimates made by RPS do not depend upon the refractive index of a particle.

Compared to VFC™, RPS lacks EV specificity and is not suitable for surface cargo measurement. It is a useful orthogonal approach for measuring vesicle size.  RPS is one approach to measuring size that Cellarcus uses to provide size estimates for its size standards.

How does vFC™ compare to EM (electron microscopy)?

RPS is a much more precise technology compared to NTA for estimating particle size distribution and concentration and can be used for vesicle analysis. It performs equivalently to vFC™ for vesicle size and concentration estimation, although accuracy of RPS is limited by a lack of vesicle specificity. Compared to VFC™, it lacks EV specificity and is not suitable for surface cargo measurement.

How does vFC™ compare to super resolution microscopy?

Super-resolution microscopy is being commercialized for EV measurement by ONI.  Super res. is similar to EM in that it is an imaging-based approach and is very sensitive, but unlike EM it cannot visualize unlabeled EVs. It is low throughput and lacks standardization, like other methods in the EV field. Super res. relies on immobilization of EVs to a slide which again, will not capture all EVs. EV size determination is based on estimating the diameter of clusters of antibodies which is problematic for EVs expressing markers at low abundance and could be affected by marker expression patterns which differ from EV to EV. It is, however, very sensitive, and it is a useful visualization tool which can be used as a complement to other methods.

How does vFC™ compare to SP-IRIS (such as Leprechaun)?

SP-IRIS (eg. Leprechaun) is a new entrant in the small particle characterization. It offers improved cargo measurement capabilities to NTA and RPS and is better tailored to small particle measurement than conventional flow cytometry. However, SP-IRIS suffers from a similar low throughput to NTA and RPS and lacks standardization like other approaches. SP-IRIS is also not capable of measuring all EVs in a sample.  Biological EV surface antigen profiles are very heterogeneous both within and between different cell types yet, SP-IRIS relies on immunocapture of EVs which misses all EVs not expressing a given surface marker. Due to its antigen specificity, it is, perhaps, well suited as an orthogonal approach for rare event detection, but not likely useful for characterization and QC of functional/therapeutic EV preparations.

How does vFC™ compare to other flow cytometry-based methods?

RPS is a much more precise technology compared to NTA for estimating particle size distribution and concentration and can be used for vesicle analysis. It performs equivalently to vFC™ for vesicle size and concentration estimation, although accuracy of RPS is limited by a lack of vesicle specificity. Compared to VFC™, it lacks EV specificity and is not suitable for surface cargo measurement.

Should I measure cargo via ELISA or Western Blot?

No. In the past there were no methods with sufficient sensitivity to measure cargo on individual EVs.  The field relied upon bulk measurements such as western blot or ELISA to confirm the presence of particular markers in enriched fractions of EVs.  However, methods for enriching EVs are variable.  There is no method that results in a “pure” population of EVs.  Bulk measurements of EV cargo, therefore, suffer from specificity issues.  Furthermore, they provide no information on the distribution of cargo among EVs or the co-expression of markers together on the same EV.

While bulk EV methods for -omics measurements still have their place as there is now suitable single EV counterpart, modern approaches to EV characterization should avoid legacy methods such as ELISA and western blot.

EV Measurement Methods Summary

Beads for Instrument QC and Calibration

The first step to analyzing vesicles is to evaluate and set up your instrument.  We provide nanoRainbow Beads for instrument evaluation and QC and vCal™ calibrated antibody capture beads to perform fluorescence calibration.  Using these beads according to protocol ensures reproducible measurements and allows EV researchers to convert their data into meaningful units.

Lipo100™ and Other Synthetic Vesicles

We provide Lipo100™ synthetic liposomes of known size distribution as standards for consistent, accurate estimate of vesicle size. These standards are, additionally, negative for all markers and are suitable as a negative control for vesicle cargo measurement.  They are included with all vFC™ kits.

vRP™ Marker Specific Positive Control Samples

When possible, our vTag™ antibodies are sold with (include) a vesicle Reference Prep (vRP™) expressing a marker of interest. These are well-characterized populations of vesicles either engineered or natively expressing a target.  Positive support interpretation of negative events by ensuring that the antibody staining worked whether measurements were performed by vFC™ or other methods.

Publications Featuring vFC™